Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MIRNRLSELLSERGLKISRVAKDVKIARSSLTSMAQNDSEMIRYDAIDKLCSYLHISPSEFFEHNPINFDFTFDEEPNYKINDVFEGFEVTANITHAFSIENFDFEILVDVELDNRQKLNFDLDVSYKETEKITNSQHRFIFTIKNEDENIGLKKYVDSLSAGLKNLLFKKINQKLSGYVSEIIVKNIDDIEELFPNKGEKSTTLHKEILQTDSRLSSDIFKEY
1UTX Chain:A ((1-66))
MIINNLKLIREKKKISQSELAALLEVSRQTINGIEKNKYN-PSLQLALKIAYYLNTPLEDIFQWQPE-------------------------------------------------------------------------------------------------------------------------------------------------------------
General information:
TITO was launched using:
RESULT:
Template:
1UTX.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -45487 for 426 contacts (-106.8/contact) +
2D Compatibility (PS) -6752 + (NN) -1545 + (LL) 10548
1D Compatibility (HY) -3600 + (ID) 650
Total energy: -47486.0 ( -111.47 by residue)
QMean score : 0.690
(partial model without unconserved sides chains):
PDB file :
Tito_1UTX.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1UTX-query.scw
PDB file :
Tito_Scwrl_1UTX.pdb
: