Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MPLVSMKEMLIDAKENGYAVGQYNINNLEFTQAILEASQEENAPVILGVSEGAARYMSGFYTIVKMVEGLMHDLNITIPVAIHLDHGSSFEKCKEAIDAGFTSVMIDASHSPFEENVATTKKVVEYAHEKGVSVEAELGTVGGQEDDVVADGIIYADPKECQELVEKTGIDALAPALGSVHGPYK-GEPKLGFKEMEEIGLSTGLPLVLHGGT---------------------GIPTKDIQKAIPFGTAKINVNTENQIASAKAVRDVLNNDKEVYDPRKYLGPAREAIKETVKGKIKEFGTSNRAK |
| 2ISV Chain:B ((2-307)) | -PLCTLRQMLGEARKHKYGVGAFNVNNMEQIQGIMKAVVQLKSPVILQCSRGALKYSDMIY-LKKLCEAAL-EKHPDIPICIHLDHGDTLESVKMAIDLGFSSVMIDASHHPFDENVRITKEVVAYAHARSVSVEAELG----------QNTVQLTEPQDAKKFVELTGVDALAVAIGTSHGAYKF--IRLAIDRVKTISDLTGIPLVMHGSSSVPKDVKDMINKYGGKMPDAVGVPIESIVHAIGEGVCKINVDSDSRMAMTGAIRKVFVEHPEKFDPRDYLGPGRDAITEMLIPKIKAFGSAGHA- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2ISV.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -91300 for 2403 contacts (-38.0/contact) +
2D Compatibility (PS) -30113 + (NN) -14438 + (LL) 656
1D Compatibility (HY) -24400 + (ID) 6300
Total energy: -165895.0 ( -69.04 by residue)
QMean score : 0.554
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