Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MRNDLETLKHIIDSSNRITFFTGAGVSVASGVPDFRSMGGLFDEISKDGLS-PEYLLSRDYLEDDPEGFINFCHKRLLFVDTKPNIVHDWIAKLERNQQSLGVITQNIDGLHSDAG--SQHVDELHGTLNRFYCNACHKSYT----KSDVIDRTLKHCDNCGGAIRPDIVLYGEMLDQPTIIRALNKIEHADTLVVLGSSLVVQPAAGLISHFKGD-NLIIINKDRTPYDSDATLVIHDDMVSVVKSLMTE |
4V1C Chain:A ((16-226)) | -------------ACQRVVVMVGAGISTPSGIPDFRSP---YSNLQQYDLPYPEAIFELPFFFHNPKPFFTLA-KELYPGNYKPNVTHYFLRLLHDKGLLLRLYTQNIDGLERVSGIPASKLVEAHGTFASATCTVCQRPFPGEDIRADVMADRVPRCPVCTGVVKPDIVFFGEPLPQRFLLHVVD-FPMADLLLILGTSLEVEPFASLTEAVRSSVPRLLINKD-------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4V1C.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -76347 for 1542 contacts (-49.5/contact) +
2D Compatibility (PS) -21255 + (NN) -6575 + (LL) 2956
1D Compatibility (HY) -17600 + (ID) 3350
Total energy: -122171.0 ( -79.23 by residue)
QMean score : 0.439
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