Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MKLKSFVTATLALGLLSTVGAALPSHEASADSNNGYKELTMDGKHTVPYTISVDGITALHRTYFVFPENKKVLYQEIDSKVKNELASQRGVTTEKINNAQTATYTLTLNDGNKKVVNLKKN-----------DDAKNSIDPSTIKQIQIVVK
1FNU Chain:A ((114-218))
-------------------------------------------PKKIVVKVSIDGIQ--SLSFDIETNKKMVTAQELDYKVRKYTIDNKQLYTNGPSKYETGYIKFIPKNKESFWFDFFPEPEFTQSKYLMIYKDNETLDNKT-SQIEVYL-
General information:
TITO was launched using:
RESULT:
Template:
1FNU.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -26793 for 610 contacts (-43.9/contact) +
2D Compatibility (PS) -10418 + (NN) -1911 + (LL) 3080
1D Compatibility (HY) -5600 + (ID) 850
Total energy: -42492.0 ( -69.66 by residue)
QMean score : 0.614
(partial model without unconserved sides chains):
PDB file :
Tito_1FNU.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1FNU-query.scw
PDB file :
Tito_Scwrl_1FNU.pdb
: