Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | ----MEKIENEIVNKTYLAINSLEELRNMIGIKSDYFYKCLYVNDHFYNVIKIPK--RKKDEYRELMIPNMALKNIQR------------WILDNVLYRRQVHKCATGFVPRKSIVNNAIPHVGQKYILKMDIENFFPSITFKQVRKIFSEMG----YKFELATALANLCTVNNQL--PQGAPTSPYIANI---IFYNIDKRIFSYCQKNNLRYTRYADDITISGSNKVSFSKEIIREIVNQYNFRINESKTIMFKPGDRKKVTGIIVNEKISVPKTLIREVRKQIYFVNKFGLEEHLIRNNYSLDYEQQFIMS--------IYGKISFIKMIDFKKGVSLQKKFNEVLGNIESSNMYRDNIDFDDIELHWIN-------- |
4MFL Chain:A ((23-345)) | MDPETVRIALGLEERTAAWLTELDELGP------------------PAEPVRLPRGEEARDLLRRLEVPELDAEEIVAAAPDPDRDPALWWLLERTHHAIVRHMGDHRAKPRG---GPPLPYEGGAAARYFHVYVFL--ATVPAVRRFHAERGIPDEVGWETLTQLGELVAIHRRKYGQGGMNMQWWTTYHLRGILYRLGRLQFSLATGKD-------------GTPHLGLA-------VPEWGGPLLPKAYDESLHRARPFFDRHF-------PEHGARVAWGSSWMLD-PQLEEYLTEDSNIIQLARFWTLTDSAPEPGNADGDSSILEFVFRYNGQPLDELPQ-------RSSLERAVIAHLKAGRHWHMRTGFVKLP |
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General information:
TITO was launched using:
| RESULT:
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Template: 4MFL.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -47741 for 2084 contacts (-22.9/contact) +
2D Compatibility (PS) -29304 + (NN) 909 + (LL) 4648
1D Compatibility (HY) -2800 + (ID) 2550
Total energy: -76838.0 ( -36.87 by residue)
QMean score : 0.233
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