Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MIVEVEHQRQGVDLIKIDNDE-TKIIFTNYGARVVSWKYHDNNIVLGNVVEADEFYHSNPFKFGASIGRYSGRIDNAKFKLKGKEYQLEKNNGEHHLHGGCHGLDNKLFDYEIRNEIAQIKVIFKTVLKSADDHFPGDIDVTITHIYDADHQWSIEYEAVASEDTLFSPMNHVYFNLNRD-NNVVDNH--RISSNQLDMYVLDERNIVTGDILDLHEV---FEDNKIKLSDIFTSQHAQLSQQMTRFGGLDHPFTVGEHKMYVENHEFMLE-----VDTDMPHVVFFTFNQPDEWDSPFNIYKP--HSGFTLETQFLPNDINLYGEKAPSI----LKAGEVFNSKTSFRIEEKVEND |
1NSS Chain:B ((2-341)) | -SIKIRDFGLGSDLISLTNKAGVTISFTNLGARIVDWQKDGKHLILG-FDSAKEYLEKDAYP-GATVGPTAGRIKDGLVKISGKDYILNQNEGPQTLHGGEESIHTKLWTYEVTDLGAEVQVKFSLVSNDGTNGYPGKIEMSVTHSFDDDNKWKIHYEAISDKDTVFNPTGHVYFNLNGDASESVENHGLRLAASRF-VPLKDQTEIVRGDIVDIKNTDLDFRQEK-QLSNAFNSNMEQV--QLVK--GIAHPFLLDQLGLDKEQARLTLDDTSISVFTDQPSIVIFTANFGD-LGTLYHEKKQVHHGGITFECQVSPGS-----EQIPELGDISLKAGEKYQATTIYSLHTKLE-- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1NSS.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -102529 for 2701 contacts (-38.0/contact) +
2D Compatibility (PS) -35133 + (NN) -9336 + (LL) 608
1D Compatibility (HY) -24000 + (ID) 5900
Total energy: -176290.0 ( -65.27 by residue)
QMean score : 0.475
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