Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MKRLENKVAVVTGASTGIGQASAIALAQEGAYVLAVDI-AEAVSETV-DKIKSNGDNAKAYNVDISDEQQVVDFVSDIKEQFGRIDVLFNNAGV--DNAAGRIHEYPIDVYDKIMNVDMRGTILMTKMMLPLMMNQG-GSIVNTSSFSGQAEDLYRSGYNAAKGAVINFTKSIAIEYGRDGIRSNAIAPGTIETPLVDKLTGTSEDDAGKTFRENQKWMTPLGRLGKPEEVAKLVVFLASDDSSFITGETIRIDGGVMAYTWPGEMLSDDSWKRTLE |
2CFC Chain:D ((2-248)) | -----SRVAIVTGASSGNGLAIATRFLARGDRVAALDLSAETLEETARTHWHAYADKVLRVRADVADEGDVNAAIAATMEQFGAIDVLVNNAGITGNSEAGVLHTTPVEQFDKVMAVNVRGIFLGCRAVLPHMLLQGAGVIVNIASVASLVAFPGRSAYTTSKGAVLQLTKSVAVDYAGSGIRCNAVCPGMIETPMTQWRLDQPE------LRDQVLARIPQKEIGTAAQVADAVMFLAGEDATYVNGAALVMDG---AYT---------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2CFC.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -96312 for 2096 contacts (-46.0/contact) +
2D Compatibility (PS) -25941 + (NN) -7805 + (LL) 1592
1D Compatibility (HY) -14400 + (ID) 4850
Total energy: -147716.0 ( -70.48 by residue)
QMean score : 0.494
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