Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MTVLTDKIAVVTGAGSGIGEAIATLLHEEGAKVVLAGRNKDKLQNVANQLAQDSVK--VVP--TDVTNKEEVDELMKIAQQTFGGLDIVINSAGQMLSSKITDYQVDEWDSMIDVNIKGTLYTAQAALPTMLEQS--SGHLINIASISGFEVTKSST--IYSATKAAVHTITQGLEKEL--AKTGVKVTSISPGMVDTAITAAYNPSDRKK---LDPQDIAEAVLYALTQPKHVNVNEITVRPV
1XG5 Chain:B ((27-276))
MERWRDRLALVTGASGGIGAAVARALVQQGLKVVGCARTVGNIEELAAECKSAGYPGTLIPYRCDLSNEEDILSMFSAIRSQHSGVDICINNAGLARPDTLLSGSTSGWKDMFNVNVLALSICTREAYQSMKERNVDDGHIININSMSGHRVLPLSVTHFYSATKYAVTALTEGLRQELREAQTHIRATCISPGVVETQFAFKLH------MKCLKPEDVAEAVIYVLSTPAHIQIGDIQMRP-
General information:
TITO was launched using:
RESULT:
Template:
1XG5.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -126429 for 1841 contacts (-68.7/contact) +
2D Compatibility (PS) -24732 + (NN) -9490 + (LL) 176
1D Compatibility (HY) -18800 + (ID) 4100
Total energy: -183375.0 ( -99.61 by residue)
QMean score : 0.531
(partial model without unconserved sides chains):
PDB file :
Tito_1XG5.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1XG5-query.scw
PDB file :
Tito_Scwrl_1XG5.pdb
: