Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
--MIYQKQRNTAETQLNISISDDQSP------SHINTGVGFLNHMLTLFTFHSGLSLNIEAQGDIDVDDHHVTEDIGIVIGQLLLEMIKDKKHFVRYGTMYIPMDETLARVVVDISGRPYLSFNASLSKEKVGTFDTELVEEFFRAVVINARLTTHIDLIRGGNTHHEIEAIFKAFSRALGIALTATDDQRVPSSKGVIE
1RHY Chain:A ((2-187))
SERIASVERTTSETHISCTIDLDHIPGVTEQKINVSTGIGFLDHMFTALAKHGGMSLQLQCKGD------LTAEDCALALGEAFKKALGERKGIKRYGYAYAPLDESLSRAVIDISSRPYFMCHLPFTREKVGDLSTEMVSHLLQSFAFAAGVTLHIDSIRGENNHHIAESAFKALALAIRMAISR--------------
General information:
TITO was launched using:
RESULT:
Template:
1RHY.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -165692 for 1469 contacts (-112.8/contact) +
2D Compatibility (PS) -18236 + (NN) -6592 + (LL) 720
1D Compatibility (HY) -12000 + (ID) 3300
Total energy: -205100.0 ( -139.62 by residue)
QMean score : 0.515
(partial model without unconserved sides chains):
PDB file :
Tito_1RHY.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1RHY-query.scw
PDB file :
Tito_Scwrl_1RHY.pdb
: