Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MKMHQIPTPTMSQVIMLNDSITTAEFMVSALRDFFDKPLEEAQKLMLSIHRDGDGVCGVYPYEIAIYKAVCVRDKARA-RFPLRLMVQEVK
3O1F Chain:A ((26-106))
---------SMYKVILVNDDYTPMEFVIDVLQKFFSYDVERATQLMLAVHYQGKAICGVFTAEVAETKVA-VNKYARENEHPLLCTLEKA-
General information:
TITO was launched using:
RESULT:
Template:
3O1F.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -50676 for 540 contacts (-93.8/contact) +
2D Compatibility (PS) -8907 + (NN) -6165 + (LL) 740
1D Compatibility (HY) -7600 + (ID) 1450
Total energy: -74058.0 ( -137.14 by residue)
QMean score : 0.541
(partial model without unconserved sides chains):
PDB file :
Tito_3O1F.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3O1F-query.scw
PDB file :
Tito_Scwrl_3O1F.pdb
: