Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKEKPFNSEQMAFLEELLSHQEKHLESKLSGFSVNDLDMQSVFRLERNRLKIAYRLLGLMSFIALVLAIVLISILPLQKTEHHFVDFLNQDKHYAIIQRADKSISSNEALARSLIGAYVLNRESINRIDDKSRYELVRLQSSSKVWQRFEDLIKAQNSIYVQSHLEREVHIVNIAIYQQDNNPIASVSIAAKLLNENKLVYEKRYKIVLSYLFDTPDFDYASMPKNPTGFKITRYSITEIAPTNRND |
| 1Q5Q Chain:A ((9-235)) | --AEQIMRDRSELARKGIARGRSVVVLTFRDGVLFVAENPST---ALHKVSELYDRLGFAAVGKYNEFENLRRAGIVHADMRGYSYDRRDVTGRSLANAYAQTLGTIFTEQPKPYEVEICVAE-VGRVGSPKAPQLYRITYDGSIVDEQHFVVMGGTTEPIATAMRES--------YRADLDLEAAVGIAVNALRQGGV--------------DVASLEVAVLDQSRPRRAFRRIAGTALEQLVPAE |
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General information:
TITO was launched using:
| RESULT:
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Template: 1Q5Q.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -518 for 1826 contacts (-0.3/contact) +
2D Compatibility (PS) -22936 + (NN) -2998 + (LL) 3408
1D Compatibility (HY) -3200 + (ID) 1000
Total energy: -27244.0 ( -14.92 by residue)
QMean score : 0.139
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