Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | ----MAEWKTD--TEEVKKVVGRCREFKRSLQEE---KCSPFIKDLDSYALKIIVERRKTE--------MQLEKAIGELKKAKSNE-------DDAKVALRVLQGASVVSWIWPPARI----------AATAAIVAAEAVLKFMKEDTEK----CKRNVELLERMLEIYSNQAKASAN--LMNQAWEGIK--------KRLHFYTDKHQEFIRRLKQASDAIDNEYNFPTPGVLLEYDFERPAISYTPKKSVFNERLKDLRENFSASLYADLKDKIHHNALSNDDLERMI-------AFREQEFEKSLEDWMGAYSYDENPNDELDRMAISKEQELEKSLEDLMPSV---LGVPSYNE-SLTLAKNRCVKNFKEALEGFTEKIKESPNDSNAINEAFDNLETELERATENLSQKIDPVLERNENYTQ--KALEYREFLESRKESFIVDEKNPYPEEVSFNEWRWAEFDSVFSAIVPLEDLNKTACAHHALKALQATLKDNDLGFDATELEQIAKGFIPRGYLWHFDANVLGNLALVREELLLGVKHTKGYSLWTEFLQKQN |
| 4J0D Chain:A ((22-491)) | SMSNRLIFDADWLVPEQVQVAGQAIQYYAARNIQYVQHPVAAIQVLNVFVPAAYLHGSSVNGYQRATAPILMPNTVGGYLPGPADDPQRVTWPTNAGTIQQALKRGYVVVAAGIRGRTTVDKSGQRVGQAPAFIVDMKAAIRYVKYNQGRLPGDANRIITNGTSAGGATSALAGASGNSAYFEPALTALGAAPATDDIFAVSAYCPIHN-----LEHADMAYEWQFNGINDWHRYQPV-AGTTKNGRPKFEPVSGQLTVEEQALSLALKAQFSTYLNQLKLTASDGTHLTLNEAGMGSFRDVVRQLLISSAQTAFD-QGTDIHKYAGFVVTGNQVTDLDLSAYLKSLTRMKAVPAFDQLDLTSPENNLFGDATAKAKHFTALAQTRST-------------VTAQLADAELIQAINPLSYLTTTSSQVAKHWRIRHGAADRDTSF------------------------AIPIILAIMLENHGYGIDFALPWDIPHSGDYDLGDLFSWIDGLCQ----------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4J0D.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 74176 for 3391 contacts (21.9/contact) +
2D Compatibility (PS) -42290 + (NN) -2440 + (LL) 6224
1D Compatibility (HY) -5200 + (ID) 3550
Total energy: 26920.0 ( 7.94 by residue)
QMean score : 0.212
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