Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MQYALLFPGQGSQCIGMGKSFYESHTLAKELFERASNVLKVDMKKTLFEENELLKESAYTQPAIYLVSYIAYQLLNKQANGGLKPVFALGHSLGEVSAVSLSGALDFEKALKLTHQRGKMMQEACANKDASMMVVLGVSEESLLSLCQR---TKNVWCANFNGGMQVVLAGVKDDLKALEPTLKEMGAKRVVFLEMSVASHCPFLEPMIFKFQELLEKSLKDKFHFEIISNATNEAYHNKSKAVELLSLQLTQPVRYQDCVKS-NNDRVDVFFELGCGSVLKGLNKRLSNK-PTISVGDNKGLDEAIEFLEEYV |
3IM8 Chain:A ((3-294)) | -KTAFLFAGQGAQYLGMGRDFYDQYPIVKETIDRASQVLGYDLRYLIDTEEDKLNQTRYTQPAILATSVAIYRLLQEK---GYQPDMVAGLSLGEYSALVASGALDFEDAVALVAKRGAYMEEAAPADSGKMVAVLNTPVEVIEEACQKASELGVVTPANYNTPAQIVIAGEVVAVDRAVELLQEAGAKRLIPLKVSGPFHTSLLEPASQKLAETLAQVSFSDFTCPLVGNTEAAVMQK-EDIAQLLTRQVKEPVRFYESIGVMQEAGISNFIEIGPGKVLSGFVKKIDQTAHLAHVEDQASLVALLEKL---- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 3IM8.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -184264 for 2580 contacts (-71.4/contact) +
2D Compatibility (PS) -30770 + (NN) -10539 + (LL) -100
1D Compatibility (HY) -16000 + (ID) 5050
Total energy: -246723.0 ( -95.63 by residue)
QMean score : 0.550
|
|
|