Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | --MAFKVVQICGGLGNQM-FQYAFAKSLQKHSNTPVLLDITSFDGSN-RKMQLELFPIDLPYASAKEIAIAKM-QHLPKLVRDALKYMGFDRVSQEIVFEYEPKLLKPSRLTYFYGYFQDPRYFDAISSLIKQ-TFTLPPPPENGNNKKKEEEYHRKLSLILAAKNSVFAHIRRGDYVGIGCQLGIDYQKKAVEYMAKRVPNMELFVFCEDLKFTQNLDLGYPFMDMTTRDKDEEAYWDMLLMQSC-KHGIIANSTYSWWAAYLINNPGKIIIGPKHWLFGHENILCKEWVKIESHFEVKSQKYNA |
3TZG Chain:A ((28-272)) | DTYVTKVTDLTGEEEQVLKLEYDRDGKIIKYGDTPVRYEGDQITIGQMNKLCNVTFQIGKG--KARE-SRARCMLKVGEEVYEADKQTVYDYKGDTIFINSDYRATSDYR---FLKKVQGKYVFDQLGRLKEVMTVFTEANDS---------------------VSSCHTYYNYDNNINYQANL-----------------NLQAYVIDYD-----GVDSFFYFLLNLGQLRNRTALPN--DIGYCMNHGL---STYNVHANYRLDDENPVRIEVLY-----------NYTKLLSRIDLSYNPL-- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3TZG.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -7193 for 1624 contacts (-4.4/contact) +
2D Compatibility (PS) -23172 + (NN) 8177 + (LL) 5688
1D Compatibility (HY) 3200 + (ID) 750
Total energy: -14050.0 ( -8.65 by residue)
QMean score : 0.007
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