Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MLKRIKVGSDLNKKESLLDAFVKTYLQTLEPISSKRLKEL-ANLKVSCATIRNYFQILSKEGMLHQAHSSGARLPTFKAFENYWHKSL---RFEVLKVNEKRLKSASENFGLFTLLK-KPSLERLERVIECEKRFLILDFLAFSCAVGYSVKMEKFLLELVGRSVKEVRLIAASVNALSLARQLERLEYSSAQITRFNLMGLKTLLNSPLFFDILEGKVLERFKKGLHFIEPDCMLVTRPIEFQNERMQLLCVGKLECDYEGFFQTISKEE |
3BWG Chain:A ((8-236)) | ----------QQIATEIETYIEEHQLQQGDKLPVLE--TLMAQFEVSKSTITKSLELLEQKGAIFQVRGSGIFVRKHKRKGYISLLSNQGDFNVTSKVIELDVRKPTPEAAENLNIGMDEDIYYVKRVRYINGQTLCYEESYYTKSIVTYLNNEIVS--------HSIFHYIREGLGLKIGFSDLFLHVGQLNEEEAEYLGLE------------AGLPKLYIESIFHLTNG------QPFDYSKISYN----------YEQSQFVVQANS |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 3BWG.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -65455 for 1535 contacts (-42.6/contact) +
2D Compatibility (PS) -22311 + (NN) 3896 + (LL) 3972
1D Compatibility (HY) -3200 + (ID) 1550
Total energy: -84648.0 ( -55.15 by residue)
QMean score : 0.167
|
|
|