Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MEFYASLKSIAMHVPSERVKNAEFQQFLDTSDEWIEKRTGIKERRFANDEEKSSDLGVIAAKQAIERAHLTPQDIDLVVVATLSPDFLAMPSTACVLSAKLGIENKPAFDISAACTGFIYLLSVAKAYVESGMYENVLIVGAEKTSSVLDFKDRGTCILFGDGAGACVIGRTKRLKESVLDVQISANGNFSNYLYTPRTLKPTPFNAKEEALEPFLRMKGNEVFKLAVKTLLKDVETILEKNALKPEDVRLFIPHQANFRIIQAVREHLDFKDEQVVLTVHKYGNTSAASIPMAMCEAYEEGRLKKG--DLMLLDAFGGGLTWGSALVYFGGI |
3IL5 Chain:B ((22-339)) | -KNYARISCTSRYVPENCVTNHQLSEMMDT-DEWIHSRTGISERRIVT-QENTSDLCHQVAKQLLEKSGKQASEIDFILVATVTPDF-NMPSVACQVQGAIGATEAFAFDISAACSGFVYALSMAEKLVLSGRYQTGLVIGGETFSKMLDWTDRSTAVLFGDGAAGVLIEAAE--TPHFLNEKLQADGQRWAALTSGYTINESPFYQGHKQASKTLQMEGRSIFDFAIKDVSQNILSL-----VTDETVDYLLLHQANVRIIDKIARKTKISREKFLTNMDKYGNTSAASIPILLDEAVENGTLILGSQQRVVLTGFGGGLTWGSLLLTL--- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3IL5.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -199445 for 2912 contacts (-68.5/contact) +
2D Compatibility (PS) -32902 + (NN) -10591 + (LL) 1016
1D Compatibility (HY) -26400 + (ID) 6300
Total energy: -274622.0 ( -94.31 by residue)
QMean score : 0.466
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