Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMIIIPARLKSSRFENKMLEDIFGLPMVVRCAKNA-NL-VDECVVACDDESIMKACQKFHIKAVLTSKHHNSGTERCLEAAQILGLKNDERVLNLQGDEPFLEKKVILALLEATQNA-PFM-ATCAKVIDEEQAKSPNLVKVVLDSQNNALYFSRSLIPFLRDFD----AKRQTPLLGHIGIYGFHNKEILEELCALKPCVLEDTEKLEQ-LRALYYQKKILVKIVQ-SESMGIDTKEDLQNALKIFSPNLLKR
3K8D Chain:A ((20-263))VVIIPARYASTRLPGKPLVDINGKPMIVHVLERARESGAERIIVATDHEDVARAVEAAGGEVCMTRADHQSGTERLAEVVEKCAFSDDTVIVNVQGDEPMIPATIIRQVADNLAQRQVGMATLAVPIHNAEEAFNPNAVKVVLDAEGYALYFSRATIPWDRDRFAEGLETVGDNFLRHLGIYGYRA-GFIRRYVNWQPSP-LEHIEMLEQLRVLWYGEKIHVAVAQEVPGTGVDTPEDLERVRAEM-------


General information:
TITO was launched using:
RESULT:

Template: 3K8D.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -143516 for 1944 contacts (-73.8/contact) +
2D Compatibility (PS) -25669 + (NN) -14248 + (LL) 508
1D Compatibility (HY) -14400 + (ID) 3950
Total energy: -201275.0 ( -103.54 by residue)
QMean score : 0.546

(partial model without unconserved sides chains):
PDB file : Tito_3K8D.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3K8D-query.scw
PDB file : Tito_Scwrl_3K8D.pdb: