Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MQEKRLKAIQNKIASWIK-EIESGFIDALFSKIGPSKMLRSKLMLALLDEKTDAILLDKALNLCAIVEMIQTASLLHDDVIDKATMRRKLPSINALFGNFNAVMLGDVFYSKAFFELSKMGESIAQALSNAVLRLSRGEIEDVFVGECFNSDKQKYWRILEDKTAHFIEASLKSMAILLNKDA---KMYADFGLHFGMAFQIIDDLLDITQDANTLGKPNFSDFKEGKTTLPYLLLYEKLNQHEQGLLISYFKQD--SHEIIEWTKEKFKQHGIIEETLKIAQVYSKKALEAIKG-EN---NLILEKLAQDVIYRTF |
3LMD Chain:A ((39-349)) | --NDAMVQVEELLHTELSSGEDFLVDIVMHLTRAGGKRFRPMFALLASEFGEKP-LSENVIKAAVVVEITHLATLYHDDVMD-----------NARWDNSVAILAGDILLAHASGLMSQLGTDTVAHFAETFGELVTGQMRETVGPRD-TDPIEHYTNVIREKTGVLIASAGYLGAMHAGAAPEHIDALKNFGAAVGMIFQIVDDIIDIFS--------PGTDLREGVFTLPVLYALREDTPV-GAELRDILTGPLEDDETVNHVLELLSQSGGRQAALDEVYRYMDIANAELDRLPDSTVKEALRNLATFTVKRVG |
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General information:
TITO was launched using:
| RESULT:
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Template: 3LMD.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -119530 for 2221 contacts (-53.8/contact) +
2D Compatibility (PS) -31111 + (NN) -23040 + (LL) 1680
1D Compatibility (HY) -7200 + (ID) 2950
Total energy: -182151.0 ( -82.01 by residue)
QMean score : 0.528
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