Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MSLLVNDECIACDA--CREECPSEAIEEGDPIYSIDPDRCTECYGYDDDEPRCVSVCPVDAILPDPNNAESKEELKYKYEILKEQD
1FDB Chain:A ((1-67))
-AFVVTDNCIKCKYTDCVEVCPVDCFYEGPNFLVIHPDECIDC-------ALCEPECPAQAIFSEDEVPEDMQEFIQLNAELAEVW
General information:
TITO was launched using:
RESULT:
Template:
1FDB.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -42091 for 428 contacts (-98.3/contact) +
2D Compatibility (PS) -6961 + (NN) -8017 + (LL) 96
1D Compatibility (HY) -6400 + (ID) 1150
Total energy: -64523.0 ( -150.75 by residue)
QMean score : 0.540
(partial model without unconserved sides chains):
PDB file :
Tito_1FDB.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1FDB-query.scw
PDB file :
Tito_Scwrl_1FDB.pdb
: