Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MALPVYYDKDIDLGVIQSLQVGIIGYGVQGEAQALNLRDS------KVKVRIGLYQGSLSVSKAKKEGFE----VLG-VKELVQQSDVIMALLPDELHKEVLEKEVIPFLKEGQIIGFAHGFSV-HFNQVVL--PKGVGAILVAPKGPGSALREEYLKNR-----GLYHLIAIEQESSIHNAKAVALSYAKAMGGGRMGVLETSFKEECESDLFGEQAVLCGGLEAIVRMGFETLIKAGYPEELAYFECVHEVK-LVADLLHYKGVEGLRKHISNTAEFGAIKAREPMGNLLEKRMQKILKKIQNGAFAKDFLLEKSLNYPRLNTERKALKETKIEQIGEILRAPFNHKK |
| 3FR7 Chain:B ((56-298)) | -------------------QIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKIGLRKGSKSFDEARAAGFTEESGTLGDIWETVSGSDLVLLLISDAAQADNYEK-IFSHMKPNSILGLSHGFLLGHLQSAGLDFPKNISVIAVCPKGMGPSVRRLYVQGKEINGAGINSSFAVHQDVD-GRATDVALGWSVALGSPF--TFATTLEQEYKSDIFGERGILLGAVHGIVEALFRRYTEQGMDEEMAYKNTVEGITGIISKTISKKGMLEVYNSLTEEGKKEFNKAYSASFYPCMDILYECYEDVASGSEIRSVVLAGRRFYEKEGLPAFPMGNIDQTRMWKVGEKVRSTRP |
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General information:
TITO was launched using:
| RESULT:
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Template: 3FR7.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -127060 for 1701 contacts (-74.7/contact) +
2D Compatibility (PS) -24714 + (NN) -13914 + (LL) 1816
1D Compatibility (HY) -17600 + (ID) 4100
Total energy: -185572.0 ( -109.10 by residue)
QMean score : 0.527
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