Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MKVTFQVPSITCNHCVDKIEKFVGEIEGVSFIDASVEKKSVVVEFDTPATQD-LIKEALLDAGQEVV
1OSD Chain:A ((4-68))
-TVTLSVPGMTCSACPITVKKAISKVEGVSKVDVTFETRQAVVTFDDAKTSVQKLTKATADAGYPSS
General information:
TITO was launched using:
RESULT:
Template:
1OSD.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -53653 for 469 contacts (-114.4/contact) +
2D Compatibility (PS) -6933 + (NN) -3636 + (LL) 208
1D Compatibility (HY) -3200 + (ID) 1150
Total energy: -68364.0 ( -145.77 by residue)
QMean score : 0.780
(partial model without unconserved sides chains):
PDB file :
Tito_1OSD.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1OSD-query.scw
PDB file :
Tito_Scwrl_1OSD.pdb
: