Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MADILSQEEIDALLEVVD-ENVDIQNVQKKDIIPQRSVTLYDFKRPNRVSKEQLRSFRSIHDKMARNLSSQVSSIMRSIVEIQLHS-------VDQMTYGEFLMSLPSPTSFNV--FSMKPMGGTGVLEINPSIAFPMIDRLLGGKGSAYDQNREFSDIELNLL---DTILRQVMQILKEVWSP-VVEMYPTIDAKESSANVVQIVAQNEISIMVVLE-----IIIGHS-------RGMMNICYPVISIESILS--KMGSRDFMLSETNSKKSRNKELQALLSG-VSVDMMVFLGAVELSLKEMLDLDVGDTIRLNKVANDEVSVYVHK-KKRYLASVGFQGYRKTIQIKEVVYSEKERTKEILEMLEEQRRGKVGDIMKIEEE |
| 4B3X Chain:A ((1-363)) | ----MAKVRIYQLAKELGMETQELLELLDQMGVAYKSHASTLEEKDAEAVRELVKEQRGLQEKLAEEERRKSLPRRPPVVVIMGHVDHGKTTLLDYLRKSRIAEKEGGGITQHVGAFEVKTPQGTVVFIDTPGHEAFTTIRQRGAKVA---------DIAVIVIAADDGIMPQTEEAIAHAKAAGAKLIFAINKIDLPQADPEKVKRQLMERGFVPEEYGGDAIVIPISAKTGQGVQDLLEMILLLAELEDYRADPNAEPRGVILESKLDKQAGIIANMLVQEGTFRVGDYVVAGEAYGRIRAMMDAD-GNQ---RKEAGPGSAVQVLGFQELPHAGDVVEWVPDLEAAKEIAEERKEERKAREEEEKARRPRTMAELLR---- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4B3X.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -79522 for 2361 contacts (-33.7/contact) +
2D Compatibility (PS) -34941 + (NN) -3198 + (LL) 2176
1D Compatibility (HY) 1200 + (ID) 2900
Total energy: -117185.0 ( -49.63 by residue)
QMean score : 0.167
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