Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MIRTPKHLTKQESVNLGAYYTPPYLVDCAYKLLKKHV-GIENYTLLDTACGNKEFLKLHH-------PKKIGADIDPKCDALIINALANP---------------------------------------------KR-----ENYGI-------SQDEPLIIVGNPPYNDRTSFIKQDIKNKDFIFEIDNDLKSRDLGISFL-KSFAILKPAFICVLHPLSYLIKEANFKQLKLFKDHYRLLDAFVVSSKSFTKSNEFPIVIALYERGRMDYAGIRRFVFPTDCDTTLCLNDFDYIANYVDKYPNAKKVGACVGYFFPMRDINALKRNKTFLNAPSENAVRISQDKLIYYQYIHYFKEIAPKIPYYFGNLDIIIDHFAFLEIKDAFLKDKRARLEYFKKLFQGHPCEFD |
1O9G Chain:A ((30-218)) | ------------------AFPVRLATE-IFQRALARLPGDGPVTLWDPCCGSGYLLTVLGLLHRRSLRQVIASDVDPAPLELAAKNLALLSPAGLTARELERREQSERFGKPSYLEAAQAARRLRERLTAEGGALPCAIRTADVFDPRALSAVLAGSAPDVVLTDLPYGERTHWEGQ---------------VPGQPVAGLLRSLASALPAHAVIAVTDRSRKIPVAPVKALERLKIGTRSAVMVRAADVLEAGP---------------------------------------------------------------------------------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1O9G.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -28933 for 844 contacts (-34.3/contact) +
2D Compatibility (PS) -13134 + (NN) -7661 + (LL) 12944
1D Compatibility (HY) -2400 + (ID) 1150
Total energy: -40334.0 ( -47.79 by residue)
QMean score : 0.368
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