Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MFRKLATSVSLISL-LISNALYAKEISEADKVIKATKE-TKETKKEAKRLKKEAKQRQQIPDNKKPQYVSVDDTKTQALFDIYDTLNVNDKSFGDWFGNSALKNKTYLYAMDLLDYNNYLSIENPIIKTRAMGTYADLIIITGSLEQVNGYYNILKALNKRNAKFVLKINDKIPYAQATFLRVPKRSDPNAHTLDKGASIDESKLFEQQKKMYFNYANDVICRPNDEVCSPLRDEMVAMPTNDSVTQKPNIIAPYSLYR-LKETNNANEAQPSPYATQTAPENSKEKLIEELIANSQLIANEEEREKKLLAEKEKQETELAKYKLKDLENQKKLKALEAELKKKNTKKPRVVEVPIPPKTSDSDETMRVIKEKENYNGLLVDKETTIKRSYKGTLISENSYSKKTPINLEDLRSLEEEIKSYYVKSNGLCYANGINLYVKIKNDPYKEGMLCGYESVQKLLSPLRDKLKYDKQKLQKALLKDLK-- |
| 4OC8 Chain:A ((2-388)) | ---TFFTGETLGQVDLIVDAVYAGYKTERGGMADPLVPLVGVSRQGGFRYRG---------TRERPTLLVLTSNLAEPEWP--DQLDETTGTFIYYGDNR---------------HPGRLLHDTPRFGNQLLRQIFDWAHL-GQRHLVPPILVFTTEATGRTFRFRG-------------LAVPGSPALAATE-------DLVALWKTTEGQRFQNYKAVFTILDEAVIP--RAWVHAVGRGETSGLAPVAWNAWLSAGGIRPLMAPRSLLVRSKAEQLPATPEDQALIEVIRQRYK-------------------------------ENPFGFEACAGALTRLLLPDVARLDLTRPWRDGGRDGIGRLRIGQSP------------AAIEVDFALEAKCYGANNAVGVKEVSRLISRIKH---REFGVLVTTS-YVDRQAYQEVTDDGHPVILTTAQDIVGLLRSAGVRTPTQVDAWLDGITASV |
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General information:
TITO was launched using:
| RESULT:
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Template: 4OC8.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 121885 for 2953 contacts (41.3/contact) +
2D Compatibility (PS) -39534 + (NN) -7149 + (LL) 8772
1D Compatibility (HY) -8800 + (ID) 2750
Total energy: 72424.0 ( 24.53 by residue)
QMean score : ?
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