Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MEQKISVALKEIKRGANEIIGLEY-IEKLVRKYYETNERFIVKAGFDPTAPDLHLGHTVLIQKLALLQQYGARVKFLIGDFTAMIGDPTGKNETRKPLNREQVLENAKTYKEQ----IYKILDQKHTEVCFNSAWLDALGAKGMIELCA-KFSVARMLERDDFAKRYKENRPISIVEFLYPLLQGYDSVAM----GADIELGGNDQKFNLLVGRFLQRAYGLNKEQSIITMPLLEGLDGVQKMSKSLG-NYVGITE---EPNAMFGKIMSVSDDLMWRYYTLLSAKTLEEIEDLKHGILHQTLHPKAVKEDLASEIVARYYDNDQAFKAKEQFSKVFSANLLP---E--------ILLESDFD--EGVGVLDVLKQIGFCPSTSQARRDIQGGGVKINQEVVKDESYRF---VK--GN-YVIQLGKKRFMKLNIN |
| 2JAN Chain:A ((5-422)) | ------ILDELSWRGLIAQSTDLDTLAAEAQ-----RGPMTVYAGFDPTAPSLHAGHLVPLLTLRRFQRAGHRPIVLAGGATGMIGDPRD-VGERSLNEADTVAEWTERIRGQLERFVDFDDSPMGAIVENNLEWTGSLSAIEFLRDIGKHFSVNVMLARDTIRRRLA-GEGISYTEFSYLLLQANDYVELHRRHGCTLQIGGADQWGNIIAGVRLVRQKLGA-TVHALTVPLVTAADG-TKFGKSTGGGSLWLDPQMTSPYAWYQYFVNTADADVIRYLRWFTFLSADELAELEQATA-QRPQQRAAQRRLASELTVLVHGEAATAAVEHASRALFGRGELARLDEATLAAALRETTVAELKPGSPDGIVDLLVASGLSASKGAARRTIHEGGVSVNNIRVDNEEWVPQSSDFLHGRWLVLRRGKRSIAGVERI |
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General information:
TITO was launched using:
| RESULT:
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Template: 2JAN.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -153292 for 2860 contacts (-53.6/contact) +
2D Compatibility (PS) -41632 + (NN) -14484 + (LL) 1544
1D Compatibility (HY) -8800 + (ID) 5400
Total energy: -222064.0 ( -77.64 by residue)
QMean score : 0.497
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