Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MALLEIIHYPSKILRTISKEVVSFDSKLHQQLDDMHETMIASEGIGLAAIQVGLPLRMLIINLPQEDGVQHKEDCLEIINPKWIETKGSIMYREGCLSVPGFYEEVERFEKVKIEYQNRFAEVKILEASELLAVAIQHEIDHLNGVLFVDKLSILKRKKFEKELKELQKKQKHK
1ICJ Chain:C ((1-163))
-SVLQVLHIPDERLRKVAKPVEEVNAEIQRIVDDMFETMYAEEGIGLAATQVDIHQRIIVIDVSE-----NRDERLVLINPELLEKSGETGIEEGCLSIPEQRALVPRAEKVKIRALDRDGKPFELEADGLLAICIQHEMDHLVGKLFMDYLSPLKQQRIRQKVEKLDRLKARA
General information:
TITO was launched using:
RESULT:
Template:
1ICJ.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -84808 for 1272 contacts (-66.7/contact) +
2D Compatibility (PS) -17341 + (NN) -3551 + (LL) 376
1D Compatibility (HY) -13600 + (ID) 3350
Total energy: -122274.0 ( -96.13 by residue)
QMean score : 0.493
(partial model without unconserved sides chains):
PDB file :
Tito_1ICJ.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1ICJ-query.scw
PDB file :
Tito_Scwrl_1ICJ.pdb
: