Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MSEQRKESLQNNPNLSKKDIKIVEKILSKNDIKAAEMKERYLKEGLYVLNFMSSPGSGKTTMLENLADF-K-DFKFCVVEGDLQT-NRDA------DRLRK-KGVSA-HQITTGEACHLE---ASMIEGAFDLLKDEGALEKSDFLIIENVGNLVCPS-------SY-NLGAAMNIVLLSVPEGDDKVL-KY---PT-----MFMCADAVIISKADMIEVFNFRVSQVKEDM----------------------------QKLKPEAPIFLMSSKDPKSLEDFKNFLLEKKRENYQSTHSF |
| 1YRB Chain:A ((10-257)) | -----------------------------------------HGMASMIVVFVGTAGSGKTTLTGEFGRYLEDNYKVAYVNLDTGVKELPYEPSIDVREFVTVEEIMREGYGPNGAIVESYDRLMEKFNEYLNKILR--LEKENDYVLIDTPGQMETFLFHEFGVRLMENLPYPLVVYISDPEILKKPNDYCFVRFFALLIDLRLGATTIPALNKVDLLSEE--EKERHRKYFEDIDYLTARLKLDPSMQGLMAYKMCSMMTEVLPPVRVLYLSAKTREGFEDLETLAYEHYCTCG------ |
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General information:
TITO was launched using:
| RESULT:
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Template: 1YRB.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -82761 for 1356 contacts (-61.0/contact) +
2D Compatibility (PS) -20465 + (NN) -10507 + (LL) 3264
1D Compatibility (HY) -6800 + (ID) 1200
Total energy: -118469.0 ( -87.37 by residue)
QMean score : 0.493
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