Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | ------------------------------------------------------------------------------------------------------MAIDLAEVTGAKAAQERKKEQPTI----ANGLDKNAFMKLFLEQLKNQDPTAP-METDKIITQTAQLTQVEMQEENKKTMQEVASAMKSNKETNESLKDFQGALKDTMENLNKGMDDSLKANNALREVSALNSVSMIGKIAETDVSGANFDGNNKLSFSLFFDEKIDASKG-VPAIQILNENNELVKTIPLKDYNGQK--GYINFEWDGTNEKGEKVPKGNYKIKAEYNLDSQSKQYLQTRI--------GRGEVESV-----IFDK-GKPM-----------------LRMGEMILPIDSAIEF--YKPDQKPLDQKLSDQKPQKLSEQKALEQKISEQKPQEPLDQKLSDQKPQKPLEQKISEQKPLDQKLSDQKPQKPLEQKISEQKPLDQK--PQTPPKETA---------------------------------- |
| 4WBD Chain:A ((2-541)) | HMQLTELSIKNQNVFVQHYIDGKEEMSSFFDYSIHHKDMWRERLEDLSSRFFAREELAAYLTSYHNKFGSSAMQSAIEKLKDPSSAAVVGGQQAGLLTGPLYTIHKIISIIVLAKQQEKELQVPVIPIFWVAGEDHDLDEINFVHTSEENGPVKKKLPQSYWKKSSAASTSLD-QEKCAAWIDDVFAAFEETDHTNTLLDNVKRCLRESV-TFTDFFELLIADLFQEEGLVLLNSGDPGIKKLETAMFQKILRENDELARAVSDQQAFMRQAGYKPIIESGKEQANLFYEYEDERFLIEKDNGRFVIKELDLGWTRDELHTHMEEHPERFSNNVVTRPLMQEFLIPTLAFIAGPGEINYWGELKQAFAVMGFKMPPVMPRLNITILERHIEKKLAERNISLQDAIERGTENQRETYFERQIPEEFTAVMDQAKSQIEAIHKTVRQEALKVDQSLEPLLLKNAAFIQDQLQFLERTVMKRIEEKEGYVLKDYERIQNSIKPLLAPQERIWNIMYYLNRYGPKFFTTFKNLPFSFQNQHQVVKL |
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General information:
TITO was launched using:
| RESULT:
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Template: 4WBD.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 145562 for 2322 contacts (62.7/contact) +
2D Compatibility (PS) -37393 + (NN) 6 + (LL) 312
1D Compatibility (HY) -6800 + (ID) 2750
Total energy: 98937.0 ( 42.61 by residue)
QMean score : 0.126
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