Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MNVFEKIIQGEIPCSKILENERFLSFYDINPKAKVHALVIPKQSIQDFNGITPE---LMAQMTSFIFEVVEKLGIKEKGYKLLTNVGKNAGQEVMHLHFHILSGDKH
1AV5 Chain:B ((16-117))
-TIFGKIIRKEIPAKIIFEDDRCLAFHDISPQAPTHFLVIPKKHISQISVAEDDDESLLGHLMIVGKKCAADLGLN-KGYRMVVNEGSDGGQSVYHVHLHVLGGRQM
General information:
TITO was launched using:
RESULT:
Template:
1AV5.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -87360 for 694 contacts (-125.9/contact) +
2D Compatibility (PS) -10786 + (NN) -6889 + (LL) 312
1D Compatibility (HY) -9600 + (ID) 1950
Total energy: -116273.0 ( -167.54 by residue)
QMean score : 0.742
(partial model without unconserved sides chains):
PDB file :
Tito_1AV5.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1AV5-query.scw
PDB file :
Tito_Scwrl_1AV5.pdb
: