Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MDSTLKHLAIIMDGNGRWAKLKNKARAYGHKKGVKTLKDITIWCANHKLECLTLYAFSTENWKRPKSEVDFLMKMLKKYLKDERSTYLDNNIRFRAIGDLEGFSKELRDTILRLENDTRYFKDFTQVLALNYGSKNELSRAFKSLLEN------PPNHINNIESLENEISHRLDTHDLPEVDLLLRTGGEMRLSNFLLWQSSYAELFFTPILWPDFTPKDLENIISDFYKRVRKFGELKC
2E99 Chain:B ((19-243))
-----RHVAIIMDGNGRWAKKQGKIRAFGHKAGAKSVRRAVSFAANNGIEALTLYAFSS----------SALMELFVWALDSEVKSLHRHNVRLRIIGDTSRFNSRLQERIRKSEALTAGNTGLTLNIAANYGGRWDIVQGVRQLAEKVQQGNLQPDQID-----EEMLNQHVCMHELAPVDLVIRTGGEHRISNFLLWQIAYAELYFTDVLWPDFDEQDFEGALNAFANRERRF-----
General information:
TITO was launched using:
RESULT:
Template:
2E99.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -106113 for 1549 contacts (-68.5/contact) +
2D Compatibility (PS) -22287 + (NN) -10368 + (LL) 1472
1D Compatibility (HY) -14000 + (ID) 4550
Total energy: -155846.0 ( -100.61 by residue)
QMean score : 0.485
(partial model without unconserved sides chains):
PDB file :
Tito_2E99.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2E99-query.scw
PDB file :
Tito_Scwrl_2E99.pdb
: