Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MLEDYAISLEEV---N-FNDFIVVDVRELDEYEELHLPNATLISVN-DQEKLADFLSQHKDQKVLLHCRAGRRALDAAKSMHELGYT-PYYLEGNVYDFEKYGFRMVYDDTSLSDKKN
3TP9 Chain:A ((373-473))
---YANVSPDEVRGALAQQGLWLLDVRNVDEWAGGHLPQAHHIPLSKLAAHIHDV---PRDGSVCVYCRTGGRSAIAASLLRAHGVGDVRNMVGGYEAWRGKGFPVEA----------
General information:
TITO was launched using:
RESULT:
Template:
3TP9.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -49845 for 707 contacts (-70.5/contact) +
2D Compatibility (PS) -10253 + (NN) -2325 + (LL) 920
1D Compatibility (HY) -5200 + (ID) 1300
Total energy: -68003.0 ( -96.19 by residue)
QMean score : 0.599
(partial model without unconserved sides chains):
PDB file :
Tito_3TP9.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3TP9-query.scw
PDB file :
Tito_Scwrl_3TP9.pdb
: