Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MDTPNKDDSIIRFSVSLQQNLLDELDNRIIKNGYSSRSELVRDMIREKLVEDNWVEDNPNDGSKIAVLVVIYDHHQRELNQRMIDIQHASGTHVLCTTHIHMDEHNCLETIILQGNSLEIQRLQLEIGGLRGVKFAKLTKASSFEYNE
3QSI Chain:H ((4-83))
---------------------------------------------------------------KIAVLVVIYDHHQRELNQRMIDIQHASGTHVLCTTHIHMDEHNCLETIILQGNSFEIQRLQLEIGGLRGVKFAKLTKASS-----
General information:
TITO was launched using:
RESULT:
Template:
3QSI.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -48087 for 552 contacts (-87.1/contact) +
2D Compatibility (PS) -8895 + (NN) -3005 + (LL) 3432
1D Compatibility (HY) -12000 + (ID) 3950
Total energy: -72505.0 ( -131.35 by residue)
QMean score : 0.634
(partial model without unconserved sides chains):
PDB file :
Tito_3QSI.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3QSI-query.scw
PDB file :
Tito_Scwrl_3QSI.pdb
: