Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MKSNKKSNHLRAIYRALVIAIG---LAVIIVFNYFNRKNNNARSSRRACSCFFSLTGVNLEKIGSFDTGAKLIVLNH-QSLLDIIYLEAYHPSNICWIAKKELGEIPFYGHALTDTGMILID-REDKKGIVSLLKACKEKLDQNRPLVIFPEGTRGKGGEKFLPFKQGAKIIAEKFQLKIQPMVLINSIKIFNSKPLEAYKARTRLVMLESYTPDFS--SPTWYEELQERMQKEYLKHYHELNA |
3WV7 Chain:A ((10-210)) | -----------KVPHGEVTLVGAGRLGFRTALNLMQIHRGGPE----------RIKVIDGQKVSADDLIFRLMGAKIGEYKVKFIESLACDGFSRTVQGIPEYITGDNLRLIGGDVVCVEIAGGDTLPITTEIIRYAQE----RGAATISTMGVFGIGEED----------------VSVVDIDEADPENPIAAYLQAEGIHEHVLVGTGKLIRDWEPVTPHVLDRVSEVMTAEILKLLRGA-- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3WV7.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -78377 for 1572 contacts (-49.9/contact) +
2D Compatibility (PS) -20876 + (NN) -6751 + (LL) 2980
1D Compatibility (HY) -2000 + (ID) 1350
Total energy: -106374.0 ( -67.67 by residue)
QMean score : 0.238
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