Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MGFLFEKSLMGFCAHSIKIIKVTGLILSFLAAFLVAEDTHEPEEIKAKVAYVKIPQLEDLENTPVYIGQTIGVTYDLLLFDAEFLEAKIKDGWDKTQIELLNKMPKWKKVEKELFRATYYYKIKGIRASIPSLEVSAFSNKDKYIDHSIAPKVALQVTDLSKNPRYANVMAKDLQVVQYKTKDYDDKNNILVMELAFKEANWEDFHVKEAIKQGFDNASLNQIKAKEGSVFYYCVLPKTLQNLSFDYFSLSNRQFKTLSFSAIPTQDTTGIQSDLIPKNNFLVFSNVALLALCVFFLALFFIFGRKLIFLGLGILCLGFVLYNLLFTQKSALLLAHKKIRILPTQNSTILGLSRDEMPIKILGSHDDYYKILTPHEQIGWVKKDEVK |
2K2M Chain:A ((499-532)) | ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------VKQRDVLEVLDDSRKWWKVRDPAGQEGYVPYNIL- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2K2M.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -9405 for 167 contacts (-56.3/contact) +
2D Compatibility (PS) -3880 + (NN) -2499 + (LL) 28532
1D Compatibility (HY) -2400 + (ID) 300
Total energy: 10048.0 ( 60.17 by residue)
QMean score : 0.499
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