Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MTHVFEVYPKVNVFLKILHK-EGAYHKIISRMCLVKNKLKDIISVKN-ALSFSLKG---D------F-DC-------PLEENSLFKALQVLKKFLVQKNFSHSVIKSLDTLAIEVEKNIPTQAGLGGGSADAGGLLYHLNQMFDWRLSLKELYTMGSLVG---------ADTNFFISQYKSANATS-YGEVIE-NFEEESLEDRLEIYAPNH-VFCSTKAVYQAYKPETCFFQ-----AKEWLKKTSLECLK---TYDRNELNDLLKPALRTNPALKDIESQL--S-KEWFFSGSG--SAFFRLKNTQKGANETHCQQ |
| 1KKH Chain:A ((5-296)) | -HMIIETPSKVILF----GEHAV-VYGYRAISMAID-LTSTIEIKETQEDEIILNLNDLNKSLGLNLNEIKNINPNNFGDFKYCLCAIKNTLDYLNI--------EPKTGFKINISSKIPISCGLGSSASITIGTIKAVSGFYNKELKDDEIAKLGYMVEKEIQGKASITDTSTITYKG-ILEIKNNKFRKIKGEFEEFLKNCKFLIVYA-EKRKKKTAELVNEVAKIENKDEIFKEIDKVIDEALKIKNKEDFGKLMTKNHELLKKL-NISTPKLDRIVDIGNRFGFGAKLTGAGGGGCVIILVNEEKEKELLKELN |
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General information:
TITO was launched using:
| RESULT:
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Template: 1KKH.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -65920 for 2004 contacts (-32.9/contact) +
2D Compatibility (PS) -26336 + (NN) -5759 + (LL) 1520
1D Compatibility (HY) -4800 + (ID) 1900
Total energy: -103195.0 ( -51.49 by residue)
QMean score : 0.304
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