Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | ---MQNPIEIKAKTLEEALIQASIALNCPIINLQYEVIQMPSK----GFLNIGKKEAIILVGVKE----SVKEVKEESVKEIHQN-AEEKQSLGIKTPQEEIITP----KPPKKTPKEESHNGDKLHEI----------KQELKDLFSH-LPY------------------KINKVEVSLYEPGVLLIDIDG-------EDSALLIGEKGYRYKALSY----LLFNWIHPAYGYSIHLEISTFLQNQEKVMEAQLQSTIMTVHEVGKGQMKAPDGVLTYIALKKLRKAFPNKYVSIKTNLNDEKYIVINDFNNE----- |
| 4XZZ Chain:A ((24-339)) | LNASDRLLEIMRLYQKQGLEMVGQKLDSYLADKSFWAEELQNKDTDFGYYQ---NKQFLFVANKSKPSLEFYEIENNMLKKINSSKALVGSKKGDKTLEGDLATPIGVYRITQKLERLDQYYGVLAFVTNYPNLYDTLKKRTGHGIWVHGMPLNGDRNELNTKGCIAIENPLLSSYDKVLKGEKAFLITYEDKFFPSTKEELSMILSSLFQWKEAWARGDFERYMRFYNPNFTRYDGMKFNAFKEYKKRVFAKNEKKNIAFSSINVIPYPNSQNKRLFYVVFDQDYKAYQHNKLSYSSNSQKELYIEIENNQVSIIMEK |
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General information:
TITO was launched using:
| RESULT:
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Template: 4XZZ.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 23728 for 1632 contacts (14.5/contact) +
2D Compatibility (PS) -26864 + (NN) -3376 + (LL) 96
1D Compatibility (HY) -6800 + (ID) 2050
Total energy: -15266.0 ( -9.35 by residue)
QMean score : 0.156
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