Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MRKLIQFLFIAVVLFLVEYVLINQAAILFLVTSGIIQLCGVIIAIRLLLFDQRNTSSKVAWVAVIFILPVLGTISYLVFGRNPATRKFSTAQVKEKTKLINAIHAIPNNTNEKLPRLSKRIAHLTSIEPIKGNKIEILTNGEETFPVLLDALRKAENHIHIQYYIFKTDAISTEIRDILVEKAKSG--VEVRFMFD-GLGSSKLGKAFLAPLKEAGVSIHAFDP---IASPWIVRTANLRNHRKIVVIDGQIGFTGGLNIGEEYRSNTPDFRVWRDTHI--KITGQA-VIELQESFLN-------------DWVYMENQAGAADGFISESGSKQYFSPVDMGDEWAQVIYGGPYDKEKWVRDSMLDLIDSAKESVWIVSPYFVPDEESLAVIRRVAMSGVDVRVIIPGKGDRGISFHGSN----------AYVKTMIEAGAKMYAYAD------------DSFVHAKAMLVDGTRAAIGTANFDVRSFRLNHELMVFLYDESEAMHHLKRDFKKDFEDSRLFTMKDMENKPLLTRIKEVLSSLLSPIL------------ |
| 3HSI Chain:A ((4-454)) | ---------------------------------------------------------------------------------------------------------------NKTKRAEQNLNNLPFLA-LQAEQIEFLGSSAEFKTQIIELIRNAKKRIYVTALYWQKDEAGQEILDEIYRVKQENPHLDVKVLIDWHRAQRNLLATNADWYCEQRQTYQLPDDPNFFGVPINTREVFGVLHVKGFVFDDTVLYSGA-SINNVYLHQFEKYRYDRYQKITHAELADSMVNFINDYLLDFSAVYPLDVTNRPRTKEIRGNIRAYRKDLAQNGEYSLKSAVKLPNVLSVSPLFGLGASGNELNQVIEDLFLQVQKKLVICTPYFNFPRTLQHKIATLLENGKRVEIIVGDKVANDFYIPPEQPFKMAGALPYLYESNLRRFCEKFETQIESGQLVVRLWRDGDNTYHLKGVWVDDRYILLTGNNLNPRAWRLDAENGLLIYDPQQQLLAQVEKEQNQIRQ-HTKVLKHYTELEELNQYPEPVQKLLKKFARIKADKLVKMIL |
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General information:
TITO was launched using:
| RESULT:
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Template: 3HSI.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -79371 for 3050 contacts (-26.0/contact) +
2D Compatibility (PS) -42352 + (NN) -13753 + (LL) 11328
1D Compatibility (HY) -5200 + (ID) 2250
Total energy: -131598.0 ( -43.15 by residue)
QMean score : 0.286
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