Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | LYQMKNKLQVKIPGKLYVAGEYAVVESGHTAILTAVNRYITLTLEDSERNELWIPHYENPVSWPVGGELKPDGEHWTFTAEAINIATTFLKSEGIELTPVKMIIETELIDQSGAKYGLGSSAAATVAVINALMTKFYPEISMLKKFKLAALSHLVVQGNGSCGDIASCMYGGWIAYTTFDQEWVKHRLAYKSLEWFMKEPWPMLQIETLEEPVP-TFSVGWTGTPVSTGKLVSQIHAFKQEDSKNYQHFLTRNNEIMKQIIQAFHTKDEELLYSAIKENRRILQELGTKAGVNIETSLLKELADSAENMGG-AGKSSGSGGGDCGIAFSKTKELAEKLVNEWEKLGIKHLPFHTGRVQITE |
3HUL Chain:A ((2-271)) | ------SLRIRVPATTANLGP------GFDSCGLALTLYLTLDIGAEAD-SWYIEHNI-GG-------GIP-HDETNVIIETALNLAP-------NLTPHHLVMTCDIPP----ARGLGSSSAAVVAGIELANTLAELNLSKEEKVRIAAEIE------GHPDNVAPAVLGNWVVGAKLDGED----------------------FYVRHLFP-CALIAFIPKAELL--------PDTL-----PFKEAVQ-ASSIANVMIAAILRNDMTLAGEMMERDLW-----SQ------LVPHLAQIRDVAKNQGAYAACLSGAGP--TVLVFAPRNL-ANKLQTSLQTLE--------------- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 3HUL.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -101812 for 2105 contacts (-48.4/contact) +
2D Compatibility (PS) -28309 + (NN) -16262 + (LL) 7112
1D Compatibility (HY) -4800 + (ID) 2750
Total energy: -146821.0 ( -69.75 by residue)
QMean score : 0.427
|
|
|