Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MGLTFFDKARELTEEL-EKTQAESIHQAAKLVADSIMNDGIIQAFGSGHSYAAAIEVCGRAGGLIPSKVIMDPAGGYYESIEGVGSLLTHRLQAKPNDIFFLISNSGRNPMGIELAEWIKS-QGCKLIVVTALDASQTAASRHSSGKLLYEFADVILDNRSVQGDAALELEGLEGKVCGTSSFSAVLLLQQTIYEAVELMLEKGYTPPVYRSANIDGGYEYNFAIEDKFADRIFHL
2AML Chain:A ((18-178))
--MTYINEEEEMCRVILADFQT-NAEKLESLVK---NGAKEWLILATGSSLNAAQSAKYYIENLADVRITIEE----------PFNHLYYEKLSSHLDLVIGISQSGQSTSTISALERVKKEASVPVVALTSDVTS-----------EIAEFADITLDIGSGKERV---------GYVTKGFTATVLTLMLTGLHFA---------------------------------------
General information:
TITO was launched using:
RESULT:
Template:
2AML.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -104303 for 1335 contacts (-78.1/contact) +
2D Compatibility (PS) -17468 + (NN) -8194 + (LL) 3852
1D Compatibility (HY) -3600 + (ID) 1600
Total energy: -131313.0 ( -98.36 by residue)
QMean score : 0.463
(partial model without unconserved sides chains):
PDB file :
Tito_2AML.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2AML-query.scw
PDB file :
Tito_Scwrl_2AML.pdb
: