Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MNQKIVVALGGNAILSSDASAE--AQRSALEETAEYLVQFIENGDDLIISHGNGPQVGNLMLQQHAGASEKNPAMPLDTCVAMTQGSIGYWMQNALDKAFLKHGLDKVAVSLITQVVVDKDDPAFEKPTKPIGPFLNKEEAEKEMAET-GAIFLEDAGRGYRKVVPSPRPLSIKEHQIIKQLVDSGVVTISAGGGGVSVVENGLDLSGVETVIDKDFASEKLAELIDADLLVILTGVENVYINYNQPNQKKLEQVTVSELEKYIDEKQFAAGSMLPKIEAATAFVKERPHAKAIITSLENIGAMLERGAGTVIVAG |
| 4JZ8 Chain:C ((6-315)) | --KTVVIALGGNAMLQAKEKGDYDTQRKNVEIAASEIYKIHKAGYKVVLTSGNGPQVGAIKLQNQAAAGV-SPEMPLHVCGAMSQGFIGYMMSQAMDNVFCANNEPANCVTCVTQTLVDPKDQAFTNPTKPVGRFYTEQEAKDLMAANPGKILREDAGRGWRVVVPSPRPLEIVEYGVIKTLIDNNVLVICTNGGGIPCKRENKVISGVDAVIDKDLATSLLAKTLNSDYLMILTDVLNACIN-----ERKLEEIKLSEILALEKDGHFAAGSMGPKVRAAIEFTQATGKM-SIITSLSTAVDALNGKCGTRII-- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4JZ8.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -159542 for 2645 contacts (-60.3/contact) +
2D Compatibility (PS) -33310 + (NN) -16349 + (LL) 140
1D Compatibility (HY) -26000 + (ID) 6550
Total energy: -241611.0 ( -91.35 by residue)
QMean score : 0.567
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