Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MGQLKGLPVEDGFRMPGEYEPHIGCFMIWPERPD----------N-WR--LGGKPAQQNYKEVAVAISN-FEPVTMFVSPNQYK------NARK-------------------------------------ELPDTIRV------------IEMSNDDAWIRDYGPSFLVDDKGDMRGVDWGFNAWGGLLDGLYFPWDKDNQIAKKVCELE----RIDYYS--QKDFILEGCSIHVDGEGTLVTTEECLLSEGRNPNLTKIEIEQTLKKYF------HAQKVIWLKHGFYLDETNGHVDNIFNFVAPGEVVLSWTDNKSDPQ--YEIS------------RECYDILANKTDAKGRTFIIHKLHCPDPVLITQTESEGVEAINGTFPRQAGDRLAASYVNYYTAN-GAIIFPLFDDPKDKDAQELLEKLYPDRKIVGIKAREILLGGGNIHCITQHLPDKSTIRE |
| 1S9R Chain:A ((8-407)) | ---------FKGIHVYSEIGELESVLVHEPGREIDYITPARLDELLFSAILESHDARKEHKQFVAELKANDINVVELIDLVAETYDLASQEAKDKLIEEFLEDSEPVLSEEHKVVVRNFLKAKKTSRELVEIMMAGITKYDLGIEADHELIVDPMPNLYFTRDPFASV---GNG-VTIHYMRYKV-----------RQRETLFSRFVFSNHPKLINTPWYYDPSLKLSIEGGDVFIYNNDTLVVGVS-----E----RTDLQTVTLLAKNIVANKECEFKRIVAINV--PKWTNLMHLDTWLTMLDKDKFLYSPIANDVFKFWDYDLVNGGAEPQPVENGLPLEGLLQSI---INKKPVLIPIAGEGASQME-----------------IERETHFDGTNYLAIRPGVVIGYSRNEK----TNAALEA--AGIKVLPFHGNQLSLGMGNARCMSMPLSRKD---- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1S9R.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -63133 for 2674 contacts (-23.6/contact) +
2D Compatibility (PS) -32949 + (NN) -17965 + (LL) 2748
1D Compatibility (HY) -11600 + (ID) 2200
Total energy: -125099.0 ( -46.78 by residue)
QMean score : 0.373
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