Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MMNRVVLVGRLTKDPELRYTPAGVAVATFTLAVNRTFTNQ-QGE--READFINCVVWRKPAENVANFLKKGSMAGVDGRVQTRNYEGNDGKRVYVTEIVAESVQFLEPRNSNGGGGNNYQSGNNNNNYNSGGNNFGQAPTNNGGFGQDQQQSQNQNYQSTNNDPFASDGKPIDISDDDLPF
3TQY Chain:A ((7-113))
GVNKVILIGNLGQDPEVRYTPNGNAVANVTLATSTTWRDKQTGELQERTEWHRIAFFNRLAEIVGEYLRKGSKIYIEGSLRTRKWQDKNGVDRYTTEIIANEMHMLD--------------------------------------------------------------------------
General information:
TITO was launched using:
RESULT:
Template:
3TQY.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -39736 for 602 contacts (-66.0/contact) +
2D Compatibility (PS) -11248 + (NN) -3326 + (LL) -1620
1D Compatibility (HY) -6000 + (ID) 1900
Total energy: -63830.0 ( -106.03 by residue)
QMean score : 0.663
(partial model without unconserved sides chains):
PDB file :
Tito_3TQY.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3TQY-query.scw
PDB file :
Tito_Scwrl_3TQY.pdb
: