Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MLPVFICEDNRMQRERLTKYIEDYIMVEHFDMKLELSTGDPFELVSRMPTHQGM-GLYFLDIDLGQPDMNGFELAQEIRKFDPRGFIIFITTHAEL--SYMTFTYKVEALDYIIKDDIDL-LHDRVLACMKQAEERISNDQDMQKYFTFKVSDKKIIHELLDDILFFETAPTIHKVILHGKNRQVEFYGKLKNIEKMLDESFYRCHRSYIVNKKNIHELDTTKGVVKMSNGENCYASSKLIKSLSL
1SRR Chain:A ((4-119))
-EKILIVDDQSGIRILLNEVFNKE----GYQTFQAANGLQALDIVT-----KERPDLVLLDMKI--PGMDGIEILKRMKVIDENIRVIIMTAYGELDMIQESKE--LGALTHFAKPFDIDEIRDAVKKYL--------------------------------------------------------------------------------------------------------------------
General information:
TITO was launched using:
RESULT:
Template:
1SRR.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -94390 for 870 contacts (-108.5/contact) +
2D Compatibility (PS) -12060 + (NN) -5196 + (LL) 9804
1D Compatibility (HY) -7200 + (ID) 1100
Total energy: -110142.0 ( -126.60 by residue)
QMean score : 0.578
(partial model without unconserved sides chains):
PDB file :
Tito_1SRR.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1SRR-query.scw
PDB file :
Tito_Scwrl_1SRR.pdb
: