Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | --------------------------------------------MEYKNGENRIYAVNDEGVEVGEVTFVPT-----GEDMFIIDHTGVDDAARGQGIAQELVKRAVEKAKSEGKKIVPLCPFAKAEFSKKPEYQEVEASK---------- |
| 1QSM Chain:A ((3-152)) | DNITVRFVTENDKEGWQRLWKSYQDFYEVSFPDDLDDFNFGRFLDPNIKMWAAVAVESSSEKIIGMINFFNHMTTWDFKDKIYINDLYVDENSRVKGAGGKLIQFVYDEADKLGTPSVYWCT-DESNHRAQLLYVKVGYKAPKILYKRKGY |
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General information:
TITO was launched using:
| RESULT:
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Template: 1QSM.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -3348 for 564 contacts (-5.9/contact) +
2D Compatibility (PS) -9768 + (NN) 897 + (LL) 132
1D Compatibility (HY) -3200 + (ID) 750
Total energy: -16037.0 ( -28.43 by residue)
QMean score : 0.474
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