Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MSKNGNFLKKVGLAFLSILIVASTIFQTTVVKAATSYGSQFLNTVELLDKDGVPQTDFGYYDNMDVHYTWSIPNSTNVKAGDTMDFTLPSQLALATDLAFDVKDSKGQVVGTATVKKATNQVTLVFSDYVEKHSDVKGELDFWTAFNQKVITGNETVDLVFPLENGTTVIDVEVGEKTPVSPTETLFKYGWVDASNPSLIHWVVRVNYAKVNIPNAVFTDIIGAKQTLNFDSIKAFHGTYSADRVFTAGAPISSTNFSATSDGFSVALGNLTDSVQISYTTTTTDGGKSTQYDNTAKLAGTDFVTKQTSTWTPASGGGGEGGGTTGSVTLTKEDAKTKATLEGAEFKLVDSKGTVLQENITTNASGQLSIADLKFDTYQLIETKAPTGYKLDTTPVEFTIGENNQAITVTKENTLNTGSVELTKLDAATKATLAGATFELQDKEGNTLQTDLKTDENGVLKVTDLVP---GSYQFVETSAPTGYKLDNSPVSFEVIAGETDQVVKVTKENTLEVGSVELTKLDSATKATLAGATFELQDKEGNTLQT--DLKTDENGVLKVTDLVPGSYQFVETSAPTGY-KLDNSPVSFEVVAGETDQVVKVTKENTLEVGSVELTKLDSATKATLAGATFELQDKEGNTLQ-----TGLTTDENGVLKVTDLVPGTYQFVETKAPI---------GYELDTTPVSFEIVAGETDPIVKVTKENTLVPPTPVPPTPVPPTPVPPTPVPPTPLPPVPYEPTVPPTKPEVPVTPKKTENSEDSPKTTPIRITQSLPKTGDTNSFAGLGVILIALSLSGLLLKRK |
| 3KPT Chain:A ((6-353)) | -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------KRGAVDLIKTG-VNEKAMAGAVFSLFKKDGTEVKKELATDANGHIRVQGLEYGEYYFQETKAPKGYVIDPTKREFFVKNSGTIN--------------------EDGTITSGTVVKMEVKNNEEP--TIDKKINGKLEALPINPLTNYNYDIKTL-IPEDIKE---YKKYVVT-DTLDNR--LVI------QGKPIVKI---DGAEVNANVVEVAIE-GQKVTATVKDFTKMDGKKEFH-LQI-KSQVKE-GVPSGSEILNTAKIHFTNKNDVIGEKESKPVVVIPTTGIIELTKIDSANKNKMKGAEFVLKDNNGKIVVVAGKEVTGVSDENGVIKWSNIPYGDYQIFETKAPTYTKEDGTKTSYQLLKDPIDVKISENNQT--VKLTIENN------------------------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3KPT.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 41583 for 2452 contacts (17.0/contact) +
2D Compatibility (PS) -34881 + (NN) 3744 + (LL) 21176
1D Compatibility (HY) -11600 + (ID) 4400
Total energy: 15622.0 ( 6.37 by residue)
QMean score : 0.414
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