Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
LDKKAIFDSVSNMEEQIGELYQQLGDLKTNLGEMLEENNRLNLENEHLRRRLSLTDEATPEPKAETEAEHGVMAPNRKEAMQQMIELGEGYDNLVQLYKEGFHVCNVHFGSPRGNDEDCLFCLSLLNKK
3A2A Chain:A ((11-51))
--------------RQLLRLKQMNVQLAAKIQHLEFSCSEKEQEIERLNKLLRQH--------------------------------------------------------------------------
General information:
TITO was launched using:
RESULT:
Template:
3A2A.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) 2316 for 154 contacts (15.0/contact) +
2D Compatibility (PS) -4556 + (NN) -3937 + (LL) 5100
1D Compatibility (HY) -400 + (ID) 400
Total energy: -1877.0 ( -12.19 by residue)
QMean score : 0.424
(partial model without unconserved sides chains):
PDB file :
Tito_3A2A.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3A2A-query.scw
PDB file :
Tito_Scwrl_3A2A.pdb
: