Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MSTRVMYPAEIKEKAIKMKLAGKSTKEIMRTLNIKNPTQVKTWWRWYRNEETHRFHQGVGKQYKYQKGVPELPEIEQLKIALRQKELELEILKKYKALERK
1K78 Chain:A ((29-77))
--NGRPLPDVVRQRIVELAHQGVRPCDISRQLRVS-HGCVSKILGRYYETGS-------------------------------------------------
General information:
TITO was launched using:
RESULT:
Template:
1K78.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -8366 for 287 contacts (-29.1/contact) +
2D Compatibility (PS) -5281 + (NN) -2083 + (LL) 4520
1D Compatibility (HY) -2400 + (ID) 350
Total energy: -13960.0 ( -48.64 by residue)
QMean score : 0.635
(partial model without unconserved sides chains):
PDB file :
Tito_1K78.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1K78-query.scw
PDB file :
Tito_Scwrl_1K78.pdb
: