Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MDASTSFAILPSNVKQKTAFERKVNQVKAASWTNNCLTGTLDIGQFSCYFVNEKIARVTVNPFGEV-DLTPSIAAIHDNEKQAAKFTETNDCYELHFADKEVIVCKNPFQIIM-KQ-AGKRIFQTEGLAINRDKE-HQISIQSEPGTAIFGLGEKTGALNKAGS---IISMWNTDVYSPHNKDTVELYQSIPFMIADT-AKTTYGLFYDNSHRTEFDFQSFEEMYTVLAEGGQANLYIIFGEDVKEVVANYTDLTGKTPLPPKWSLGYHQSRYSYTSEEEVERIANTFKEKEIPLDCVFMDIHYMDDFRVFTFNPDTFPNGPELIARLREQNIDVVPIVDPGIKKD--VDYSVYQEGIKNNYFCTKLE-GSIYYGDVWPG---------------------VSAFPDFLSTTVQHWWGSLHKFYT--------DLGIRGIWNDMNEPSVFNESKT--------------MDL----------DVVHNL--D----GKNVTHKEAHNLYGLYMSKATFEGLKRLVPNERPFSLTRAGYAGVQRYSAVWTGDNRSHWEHLEMSLPMIMNLGLSGVAFTGADVGGFSSDCTKEMLIRWTQAGAFLPYFRNHCVQDSIYQEPWAFGADAEKIVKQYIELRYAFLPYIYTEFQKTAESGLPLVRPLYMEFKDERDLIQVNDQFMLGENILVAPIVREGQAKRLVRLPKGLWFNYWTKEQFV-GGDYIIADAPIDTMPIYIKAGTILPVGSSVQNTKETQ--ELTLEVYLDS-ETATGYVYNDDGKSYQY-ESGAVSKTTLTATFKNGEVLINATHQGEAN--LQQKVTTIQVFGEKIDKITRAGI |
| 3TOP Chain:A ((88-854)) | --------------------------------------------RLDVTYHKNEMLQFKIYDPNKNRYEVPV-PLNIPS----------MPSSTPEGQLYDVLIKKNPFGIEIRRKSTGTIIWDSQLLGFTFSDMFIRISTRLP-SKYLYGFGETEHRSYRRDLEWHTWGMFSRDQPP---GYKKNSYGVHPYYMGLEEDGSAHGVLLLNSNAMDVTFQPL-PALTYRTTGGVLDFYVFLGPTPELVTQQYTELIGRPVMVPYWSLGFQLCRYGYQNDSEIASLYDEMVAAQIPYDVQYSDIDYMERQLDFTLSP-KFAGFPALINRMKADGMRVILILDPAISGNETQPYPAFTRGVEDDVFIKYPNDGDIVWGKVWPDFPDVVVNGSLDWDSQVELYRAYVAFPDFFRNSTAKWWKREIEELYNNPQNPERSLKFDGMWIDMNEPSSFVNGAVSPGCRDASLNHPPYMPHLESRDRGLSSKTLCMESQQILPDGSLVQHYNVHNLYGWSQTRPTYEAVQEV-TGQRGVVITRSTFPSSGRWAGHWLGDNTAAWDQLKKSIIGMMEFSLFGISYTGADICGFFQDAEYEMCVRWMQLGAFYPFSRNHNTIGTRRQDPVSWDVAFVNISRTVLQTRYTLLPYLYTLMHKAHTEGVTVVRPLLHEFVSDQVTWDIDSQFLLGPAFLVSPVLERNARNVTAYFPRARWYDYYTGVDINARGEWKTLPAPLDHINLHVRGGYILPWQEPALNTHLSRQKFMGFKIALDDEGTAGGWLFWDDGQSIDTYGKGLYYLASFSASQN--TMQSHIIFNNYITGTNPLKLGYIEIWGVG--------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3TOP.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -238868 for 6233 contacts (-38.3/contact) +
2D Compatibility (PS) -74475 + (NN) -26956 + (LL) 4368
1D Compatibility (HY) -46000 + (ID) 9300
Total energy: -391231.0 ( -62.77 by residue)
QMean score : 0.453
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