Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MSIEVGNKLQGKVTGITNFGAFVELEG---GKTGLVHISEVAD-NYVKDINDILTVGDEVTVKVMNIGDDGKIGLSIRKAVDRPDRPEKSYDRKPKYNKKPAGNYVKPAESFEDIMSKFLKDSDERLTTIKRQTESKRGGRGAKRG
2EQS Chain:A ((261-345))
-EPTIGDIYNGKVTSIMQFGCFVQLEGLRKRWEGLVHISELRREGRVANVADVVSKGQRVKVKVLSFTG-TKTSLSMKDVDQETGED-----------------------------------------------------------
General information:
TITO was launched using:
RESULT:
Template:
2EQS.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -42397 for 553 contacts (-76.7/contact) +
2D Compatibility (PS) -8508 + (NN) -476 + (LL) 2480
1D Compatibility (HY) -7200 + (ID) 1500
Total energy: -57601.0 ( -104.16 by residue)
QMean score : 0.586
(partial model without unconserved sides chains):
PDB file :
Tito_2EQS.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2EQS-query.scw
PDB file :
Tito_Scwrl_2EQS.pdb
: