Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MKRNYHVKFLNEKDVELAEAVCAASEDYYLIEQDKSASKSDALKIITEIPDGKTRFDKFVLAVLDENEKPIGLVDIVSDYP--RKGRWFIGLLLLTPDARHNGLGKVLHQTIKEWASDGGADSLALGVLAENEKGRGFFEHLGYTKEETKQAS--YGGKEQEVSIFTLAIK
2AE6 Chain:A ((5-164))
-STSLTIRLVAEADWPALHALDQII---------------SLAAYQEKMK-----DETI-FVAI-SGQQLAGFIEVHPPTSLAAHQKQWLLSIGVSPDFQDQGIGGSLLSYIKDMAEISGIHKLSLRVMATNQEAIRFYEKHGFVQEAHFKEEFYINGHYCDDYQYAYFI-
General information:
TITO was launched using:
RESULT:
Template:
2AE6.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -64272 for 958 contacts (-67.1/contact) +
2D Compatibility (PS) -15557 + (NN) -5221 + (LL) 1284
1D Compatibility (HY) -6800 + (ID) 1200
Total energy: -91766.0 ( -95.79 by residue)
QMean score : 0.627
(partial model without unconserved sides chains):
PDB file :
Tito_2AE6.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2AE6-query.scw
PDB file :
Tito_Scwrl_2AE6.pdb
: